GPUMDkit

A Toolkit for GPUMD and NEP

GPUMDkit is a user-friendly toolkit for the GPUMD (Graphics Processing Units Molecular Dynamics) and NEP (Neuroevolution Potential) program. It provides a set of tools to streamline the use of common scripts in GPUMD and NEP, simplifying workflows and enhancing efficiency.

Key Features

🔄
Format Conversion

Seamlessly convert between POSCAR, XYZ, CIF, and other atomic structure formats.

📦
Sample Structures

Generate and sample structures for NEP training.

📊
Data Analysis

Built-in tools for analyzing trajectories, calculating properties, and visualizing simulation outcomes.

Quick Start

Installation
# 1. Clone the repository git clone https://github.com/zhyan0603/GPUMDkit.git
# 2. Enter directory and run installer cd GPUMDkit bash source ./install.sh
# 3. Reload shell configuration source ~/.bashrc
# 4. Ready to go! gpumdkit.sh

Preview

Main Menu
CLI Demo
Plots
Help
Terminal

Documentation

Publications using GPUMDkit

Total Publications: ...

Join Us & Cite

🛠️

Contribute

Help us improve GPUMDkit by contributing code.

Fork & PR

Star Us

Support our project by starring on GitHub.

Star
💬

Join QQ Group

QQ Group QR Scan to Join
📝

Citation

View on arXiv

GPUMDkit: A User-Friendly Toolkit for GPUMD and NEP

arXiv.2603.17367
Zihan Yan, Denan Li, Xin Wu, Zhoulin Liu, Chen Hua, Boyi Situ, Hao Yang, Shengjie Tang, Benrui Tang, Ziyang Wang, Shangzhao Yi, Huan Wang, Dian Huang, Ke Li, Qilin Guo, Zherui Chen, Ke Xu, Yanzhou Wang, Ziliang Wang, Gang Tang, Shi Liu, Zheyong Fan, Yizhou Zhu